I think this GIF gives a better summary of the game than I can:
Anyway, you have to produce the target compounds (blue area) from the inputs (green). Adjacent atoms bond to each other if they have free electrons, pushing atoms with pistons breaks all their bonds.
CONTROLS:
Left Click - place component (drag for direction)
Right Click - delete componentWASD / Arrow keys: Pan CameraZ / X: Zoom Camera
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